I received my PhD degree in 2000 in Medical Imaging from the University of Lyon, France. My dissertation topic was on the automatic labelling of the coronary arteries in X-ray angiography and based on a 3D topological model. Then, I worked as Research Follow on the segmentation of focal brain lesions at the Max Planck Institute for Human Cognitive and Brain Sciences in Leipzig, Germany.
In 2005 I joined ICCAS as researcher. My research focuses on the development of segmentation and registration tools for the computer assisted surgery.
My research areas focus on the development of tools for the processing and analysis of intraoperative ultrasound (US) imaging in neurosurgery. I implemented a semi-automatic segmentation method for the extraction of blood vessels for the evaluation of 3D intraoperative US angiography with the application of an US contrast agent. Currently, I am working on a national project in close collaboration with the neurosurgery department of the university hospital of Leipzig for the evaluation of intraoperative 3D enhanced US imaging for tumor resection.
2013 |
Chalopin C, Arnold S, Schmitgen A, Arlt F, Müns A, Meixensberger J, Lindner D Improvement of neuronavigation based on ultrasound by means of the digital video interface (Artikel) Biomed Tech, 57 (S1), Seite(n): 448-451, 2013. () @article{Chalopin20121016_3,
name = {Improvement of neuronavigation based on ultrasound by means of the digital video interface},
author = {Chalopin C, Arnold S, Schmitgen A, Arlt F, Müns A, Meixensberger J, Lindner D},
year = {2013},
date = {2013-01-01},
journal = {Biomed Tech},
volume = {57 (S1)},
pages = {448-451},
}
|
2012 |
Krissian K, Santana F, Santana-Cedrés D, Falcón-Torres C, Arencibia S, Illera S, Trujillo A, Chalopin C, Alvarez León L AMILab Software: Medical Image Analysis, Processing and Visualization (Artikel) MMVR NextMed Medicine Meets Virtual Reality, 173, Seite(n): 233-237, 2012, ISSN: 978-1-61499-021-5. (Links | ) @article{Chalopin20121016,
name = {AMILab Software: Medical Image Analysis, Processing and Visualization},
author = {Krissian K, Santana F, Santana-Cedrés D, Falcón-Torres C, Arencibia S, Illera S, Trujillo A, Chalopin C, Alvarez León L},
url = {http://www.ncbi.nlm.nih.gov/pubmed/22356993},
issn = {978-1-61499-021-5},
year = {2012},
date = {2012-10-16},
journal = {MMVR NextMed Medicine Meets Virtual Reality},
volume = {173},
pages = {233-237},
}
|
Chalopin C, Lindenberg R, Arlt F, Müns A, Meixensberger J, Lindner D Brain tumor enhancement revealed by 3D intraoperative ultrasound imaging in a navigation system (Artikel) Biomed Tech, 57 (S1), Seite(n): 468-471, 2012. () @article{Chalopin20121016_2,
name = {Brain tumor enhancement revealed by 3D intraoperative ultrasound imaging in a navigation system},
author = {Chalopin C, Lindenberg R, Arlt F, Müns A, Meixensberger J, Lindner D},
year = {2012},
date = {2012-10-16},
journal = {Biomed Tech},
volume = {57 (S1)},
pages = {468-471},
}
|
2011 |
Arlt F, Müns A, Chalopin C, Meixensberger J, Lindner D 3D Kontrastmittel - Ultraschall in der Behandlung maligner Hirntumore - intraoperative Anwendung (Artikel) 10. Jahrestagung der Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V., Seite(n): 7-9, 2011. () @article{F.2011a,
name = {3D Kontrastmittel - Ultraschall in der Behandlung maligner Hirntumore - intraoperative Anwendung},
author = {Arlt F, Müns A, Chalopin C, Meixensberger J, Lindner D},
editor = {Burgert O, Schipper J, Zachow S},
note = {ISBN: 978-3-940961-59-4},
year = {2011},
date = {2011-00-01},
booktitle = {10. Jahrestagung der Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V.},
journal = {10. Jahrestagung der Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V.},
pages = {7-9},
publisher = {Verlag Univ Magdeburg},
address = {Magdeburg},
note = {ISBN: 978-3-940961-59-4},
}
|
Chalopin C, Krissian K, Müns A, Arlt F, Meixensberger J, Lindner D Phantom-based evaluation of a semi-automatic segmentation algorithm for cerebral vascular structures in 3D ultrasound angiography (3D USA) (Artikel) 10. Jahrestagung der Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V., Seite(n): 75-79, 2011. () @article{C.2011a,
name = {Phantom-based evaluation of a semi-automatic segmentation algorithm for cerebral vascular structures in 3D ultrasound angiography (3D USA)},
author = {Chalopin C, Krissian K, Müns A, Arlt F, Meixensberger J, Lindner D},
editor = {Burgert O, Schipper J, Zachow S},
note = {ISBN: 978-3-940961-59-4},
year = {2011},
date = {2011-00-01},
booktitle = {10. Jahrestagung der Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V.},
journal = {10. Jahrestagung der Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V.},
pages = {75-79},
publisher = {Verlag Univ Magdeburg},
address = {Magdeburg},
note = {ISBN: 978-3-940961-59-4},
}
|
Müns A, Meixensberger J, Arnold S, Schmitgen A, Arlt F, Chalopin C, Lindner D Integration of a 3D ultrasound probe into neuronavigation (Artikel) Acta Neurochirurgica, 153, 7, Seite(n): 1529-1533, 2011. (Links | ) @article{A.2011a,
name = {Integration of a 3D ultrasound probe into neuronavigation},
author = {Müns A, Meixensberger J, Arnold S, Schmitgen A, Arlt F, Chalopin C, Lindner D},
note = {ISSN: 0001-6268, online published},
url = {http://www.ncbi.nlm.nih.gov/pubmed/21461876},
year = {2011},
date = {2011-00-01},
booktitle = {Acta Neurochirurgica},
journal = {Acta Neurochirurgica},
volume = {153},
number = {7},
pages = {1529-1533},
note = {ISSN: 0001-6268, online published},
}
|
Merk DR, Karar M, Chalopin C, Holzhey D, Falk V, Mohr FW, Burgert O Image-guided transapical aortic valve implantation: Sensorless tracking of stenotic valve landmarks in live fluoroscopic images (Artikel) Journal of Innovations: Technology and Techniques in Cardiothoracic and Vascular Surgery, 6, 4, Seite(n): 231-236, 2011. (Links | ) @article{D.2011a,
name = {Image-guided transapical aortic valve implantation: Sensorless tracking of stenotic valve landmarks in live fluoroscopic images},
author = {Merk DR, Karar M, Chalopin C, Holzhey D, Falk V, Mohr FW, Burgert O},
note = {ISSN: 1556-9845},
url = {http://www.ncbi.nlm.nih.gov/pubmed/22437980},
year = {2011},
date = {2011-00-01},
booktitle = {Journal of Innovations: Technology and Techniques in Cardiothoracic and Vascular Surgery},
journal = {Journal of Innovations: Technology and Techniques in Cardiothoracic and Vascular Surgery},
volume = {6},
number = {4},
pages = {231-236},
note = {ISSN: 1556-9845},
}
|
Karar M, Merk D, Chalopin C, Walther T, Falk V, Burgert O Aortic valve prosthesis tracking for transapical aortic valve implantation (Artikel) International Journal of Computer Assisted Radiology and Surgery, 6, 5, Seite(n): 583-590, 2011. () @article{M.E.2011a,
name = {Aortic valve prosthesis tracking for transapical aortic valve implantation},
author = {Karar M, Merk D, Chalopin C, Walther T, Falk V, Burgert O},
note = {ISSN: 1861-6410},
year = {2011},
date = {2011-00-01},
booktitle = {International Journal of Computer Assisted Radiology and Surgery},
journal = {International Journal of Computer Assisted Radiology and Surgery},
volume = {6},
number = {5},
pages = {583-590},
note = {ISSN: 1861-6410},
}
|
2010 |
Chalopin C, Kongtso P, Krissian K, Mayoral R, Lindner D Modeling of the cerebral vascular structures based on intraoperative ultrasound imaging (Artikel) 5, Supplement 1, Seite(n): 254-256, 2010. () @article{C.2010a,
name = {Modeling of the cerebral vascular structures based on intraoperative ultrasound imaging},
author = {Chalopin C, Kongtso P, Krissian K, Mayoral R, Lindner D},
note = {ISSN 1861-6410},
year = {2010},
date = {2010-00-01},
volume = {5},
number = {Supplement 1},
pages = {254-256},
note = {ISSN 1861-6410},
}
|
Chalopin C, Lindner D, Müns A, Arlt F, Meixensberger J Pipeline for the evaluation of navigated 3D intraoperative enhanced ultrasound imaging in neurosurgery for brain tumor resection (Artikel) 9. Jahrestagung der Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V. (CURAC), Seite(n): 35-38, 2010. () @article{C.2010b,
name = {Pipeline for the evaluation of navigated 3D intraoperative enhanced ultrasound imaging in neurosurgery for brain tumor resection},
author = {Chalopin C, Lindner D, Müns A, Arlt F, Meixensberger J},
editor = {Burgert O, Kahrs LA, Preim B, Schipper J},
note = {ISBN 978-3-86247-078-5},
year = {2010},
date = {2010-00-01},
booktitle = {9. Jahrestagung der Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V. (CURAC)},
journal = {9. Jahrestagung der Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V. (CURAC)},
pages = {35-38},
publisher = {Der Andere Verlag},
address = {Düsseldorf},
note = {ISBN 978-3-86247-078-5},
}
|
Lindner D, Chalopin C, Meixensberger J Workflowanalytik in der Neurochirurgie - wann, wie und warum (Artikel) 9. Jahrestagung der Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V. (CURAC), Seite(n): 251, 2010. () @article{D.2010a,
name = {Workflowanalytik in der Neurochirurgie - wann, wie und warum},
author = {Lindner D, Chalopin C, Meixensberger J},
editor = {Burgert O, Kahrs LA, Preim B B, Schipper J},
note = {ISBN 978-3-86247-078-5},
year = {2010},
date = {2010-00-01},
booktitle = {9. Jahrestagung der Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V. (CURAC)},
journal = {9. Jahrestagung der Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V. (CURAC)},
pages = {251},
publisher = {Der Andere Verlag},
address = {Düsseldorf},
note = {ISBN 978-3-86247-078-5},
}
|
Chalopin C, Lindner D, Müns A, Arlt F, Meixensberger J Pipeline for the evaluation of intraoperative 3D enhanced ultrasound imaging for brain tumor resection (Artikel) 9th Leipzig Research Festival for Life Sciences, 2010. () @article{C.2010a,
name = {Pipeline for the evaluation of intraoperative 3D enhanced ultrasound imaging for brain tumor resection},
author = {Chalopin C, Lindner D, Müns A, Arlt F, Meixensberger J},
editor = {Thiery J, Beck-Sickinger A, Arendt T},
note = {ISBN: 978-3-9810760-6-6},
year = {2010},
date = {2010-00-01},
booktitle = {9th Leipzig Research Festival for Life Sciences},
journal = {9th Leipzig Research Festival for Life Sciences},
address = {Leipzig},
note = {ISBN: 978-3-9810760-6-6},
}
|
Chalopin C, Kontso P, Krissian K, Mayoral R, Lindner D Modeling of the cerebral vascular structures based on intraoperative ultrasound imaging (Konferenzbeitrag) International Journal of Computer Assisted Radiology and Surgery 5 Supplement 1, Seite(n): S254, 2010. () @inproceedings{C.2010a,
name = {Modeling of the cerebral vascular structures based on intraoperative ultrasound imaging},
author = {Chalopin C, Kontso P, Krissian K, Mayoral R, Lindner D},
year = {2010},
date = {2010-00-01},
booktitle = {International Journal of Computer Assisted Radiology and Surgery 5 Supplement 1},
pages = {S254},
}
|
2009 |
Karar M, Chalopin C, Merk DR, Jacobs S, Walther T, Falk V, Burgert O Localization and tracking of aortic valve prosthesis in 2D fluoroscopic image sequences (Konferenzbeitrag) Miga MI, Wong KH (Hrsg.): Medical Imaging: Visualization, Image-guided Procedures and Modeling, Seite(n): 72/611-72/6118, 2009. () @inproceedings{M.2009b,
name = {Localization and tracking of aortic valve prosthesis in 2D fluoroscopic image sequences},
author = {Karar M, Chalopin C, Merk DR, Jacobs S, Walther T, Falk V, Burgert O},
editor = {Miga MI,Wong KH},
year = {2009},
date = {2009-00-01},
booktitle = {Medical Imaging: Visualization, Image-guided Procedures and Modeling},
volume = {7261},
pages = {72/611-72/6118},
}
|
Chalopin C, Lindner D, Mayoral R Segmentation of cerebral blood vessels in 3D intraoperative ultrasound angiographic data (3D-iUSA) (Konferenzbeitrag) Proceedings of the 23rd International Congress and Exhibition of Computer Assisted Radiology and Surgery (CARS 2009), Seite(n): 109-111, 2009. () @inproceedings{C.2009a,
name = {Segmentation of cerebral blood vessels in 3D intraoperative ultrasound angiographic data (3D-iUSA)},
author = {Chalopin C, Lindner D, Mayoral R},
year = {2009},
date = {2009-00-01},
booktitle = {Proceedings of the 23rd International Congress and Exhibition of Computer Assisted Radiology and Surgery (CARS 2009)},
pages = {109-111},
}
|
2008 |
Chalopin C, Lindner D, Mayoral R Image processing tools for extracting cerebral arteries in 3D intraoperative ultrasound angiography (3D-iUSA) (Konferenzbeitrag) Tagungsband der 7. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V. (CURAC), Seite(n): 185-187, Leipzig, 2008. () @inproceedings{C.2008a,
name = {Image processing tools for extracting cerebral arteries in 3D intraoperative ultrasound angiography (3D-iUSA)},
author = {Chalopin C, Lindner D, Mayoral R},
year = {2008},
date = {2008-00-01},
booktitle = {Tagungsband der 7. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V. (CURAC)},
pages = {185-187},
address = {Leipzig},
}
|
Lindner D, Chalopin C, Fritzsch D, Trantakis C, Meixensberger J Intraoperativer kontrastverstärkter Ultraschall für niedriggradige Gliome (Konferenzbeitrag) Tagungsband der 7. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V. (CURAC), Seite(n): 77-79, Leipzig, 2008. () @inproceedings{D.2008a,
name = {Intraoperativer kontrastverstärkter Ultraschall für niedriggradige Gliome},
author = {Lindner D, Chalopin C, Fritzsch D, Trantakis C, Meixensberger J},
year = {2008},
date = {2008-00-01},
booktitle = {Tagungsband der 7. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V. (CURAC)},
pages = {77-79},
address = {Leipzig},
}
|
Lindner D, Renner C, Trantakis C, Chalopin C, Fritzsch D, Haase R, Meixensberger J Intraoperative contrast enhanced ultrasound angiography (tUSA) - a new method in Neurosurgery (Artikel) Int J CARS, 3, 1, Seite(n): 72-73, 2008. () @article{D.2008a,
name = {Intraoperative contrast enhanced ultrasound angiography (tUSA) - a new method in Neurosurgery},
author = {Lindner D, Renner C, Trantakis C, Chalopin C, Fritzsch D, Haase R, Meixensberger J},
year = {2008},
date = {2008-00-01},
booktitle = {International Journal of Computer Assisted Radiology and Surgery (CARS)},
journal = {Int J CARS},
volume = {3},
number = {1},
pages = {72-73},
publisher = {Springer},
}
|
2006 |
Burgert O, Korb W, Gessat M, Bohn S, Chalopin C, Mayoral R, Lemke HU, Strauß G Real Time Issues for usage of Vision and Image Data in the Future Operating Room (Konferenzbeitrag) 2006 IEEE International Conference on Multisensor Fusion and Integration for Intelligent Systems, Seite(n): 285-290, 2006. () @inproceedings{O.2006d,
name = {Real Time Issues for usage of Vision and Image Data in the Future Operating Room},
author = {Burgert O, Korb W, Gessat M, Bohn S, Chalopin C, Mayoral R, Lemke HU, Strauß G},
year = {2006},
date = {2006-00-01},
booktitle = {2006 IEEE International Conference on Multisensor Fusion and Integration for Intelligent Systems},
pages = {285-290},
}
|
Chalopin C, Jacobs S, Burgert O A semi-automatic segmentation tool for vessel centreline extraction from static 2D X-ray angiograms (Konferenzbeitrag) Proceedings of Curac, Hannover, Germany, Seite(n): 134-135, 2006. () @inproceedings{C.2006a,
name = {A semi-automatic segmentation tool for vessel centreline extraction from static 2D X-ray angiograms},
author = {Chalopin C, Jacobs S, Burgert O},
year = {2006},
date = {2006-00-01},
booktitle = {Proceedings of Curac, Hannover, Germany},
pages = {134-135},
}
|
